關於「STAR aligner」標籤，搜尋引擎有相關的訊息討論：

(PDF) STAR: ultrafast universal RNA-seq aligner - ResearchGate。

In contrast to these approaches, STAR. was designed to align the non-contiguous sequences directly to. the reference genome. STAR algorithm consists of two ...。

alexdobin/STAR: RNA-seq aligner - GitHub。

RNA-seq aligner. Contribute to alexdobin/STAR development by creating an account on GitHub.： 。

STAR: ultrafast universal RNA-seq aligner - NCBI。

Results: To align our large (>80 billon reads) ENCODE Transcriptome RNA-seq dataset, we developed the Spliced Transcripts Alignment to a Reference (STAR) ...： 。

Alignment and mapping methodology influence transcript ...。

2020年9月7日 · We chose STAR, in particular, since it has the ability to project the aligned reads to transcriptomic coordinates, which allowed us to use a ...。

TopHat2: accurate alignment of transcriptomes - Genome Biology。

2013年4月25日 · The number of spliced-read alignments from TopHat2, GSNAP, RUM, MapSplice, and STAR. The RNA-seq reads are from Chen et al.[11]. TopHat2, GSNAP, ...。

[PDF] STAR manual 2.7.0a。

2019年1月23日 · STAR will output a non-chimeric alignment into Aligned.out.sam with soft-clipping a portion of the read. If this portion is long enough, ...： 。

Scavenger: A pipeline for recovery of unaligned reads utilising ...。

2018年11月26日 · Scavenger first aligns sequencing reads against the reference genome using the STAR alignment tool in the source execution step.。

accurate and repeat tolerant realignment of RNA-seq reads。

We chose Tophat2 because of its popularity as one of the first RNA-seq alignment tools and STAR for its use within the ENCODE project, its high accuracy and ...。

HSRA: Hadoop-based spliced read aligner for RNA sequencing data。

2018年7月31日 · Considering only open-source tools, state-of-the-art aligners that were evaluated include GSNAP [24], STAR [25], SOAPSplice [26], MapSplice [27] ...。

Challenges and solutions for analysing dual RNA‐seq data for non ...。

2018年12月14日 · While STAR and NextGenMap achieved a high mapping rate of pathogen reads, both aligners also mismapped host reads to the genome of the target ...